ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6tbkF1 - ECOD Domain | ECOD

ECOD/Domains/e6tbkF1

e6tbkF1

UID: 002651534

PDB

Range: F:37-415
PDB: 6TBK chain F(all domains)
UniProt: B3PBE0 (all domains)
Gene: bgl35A

Molecule: Beta-galactosidase, putative, bgl35A

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_42 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyGlyco_hydro_42(2002.1.1.94)

Ligands

in contact, ≤ 4 Å

5-(dimethylamino)-~{N}-[6-[(2~{R},3~{R},4~{S},5~{R})-3-(hydroxymethyl)-4,5-bis(oxidanyl)piperidin-2-yl]hexyl]naphthalene-1-sulfonamideN0Q
Sodium ionNA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02449Glyco_hydro_42

Beta-galactosidase

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 6TBK RCSB PDB: 6TBK PDBe: 6TBK UniProt: B3PBE0

Downloads

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