ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6tcfB1 - ECOD Domain | ECOD

ECOD/Domains/e6tcfB1

e6tcfB1

UID: 002651563

PDB

Range: B:3-173
PDB: 6TCF chain B(all domains)
UniProt: Q04544 (all domains)
Gene: ORF1

Molecule: Genome polyprotein

3D Structure

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Related Domains

Browse other domains in Peptidase_C37 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel(1.1.5)

FFamilyPeptidase_C37(1.1.5.20)

Ligands

in contact, ≤ 4 Å

methyl quinoline-6-carboxylateN1E

+ 1 additive (Dimethyl sulfoxide)

Dimethyl sulfoxideDMS
DrugBank DB01093

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF05416Peptidase_C37

Southampton virus-type processing peptidase

ClanCL0124Peptidase_PA

External Links

ECOD PDB View: 6TCF RCSB PDB: 6TCF PDBe: 6TCF UniProt: Q04544

Downloads

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