ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6tdeD2 - ECOD Domain | ECOD

ECOD/Domains/e6tdeD2

e6tdeD2

UID: 002651623

PDB

Range: D:246-441
PDB: 6TDE chain D(all domains)
UniProt: D0VWY9 (all domains)

Molecule: Tubulin beta chain

3D Structure

Loading viewer...

Related Domains

Browse other domains in Tubulin_C →

Classification

AArchitecturea+b three layers(a.12)

XX-groupBacillus chorismate mutase-like(301)

HH-groupTubulin C-terminal domain-like(301.6)

TT-groupTubulin C-terminal domain-like(301.6.1)

FFamilyTubulin_C(301.6.1.1)

Ligands

in contact, ≤ 4 Å

Guanosine-5'-TriphosphateGTP
drugDrugBank DB04137
Magnesium ionMG
metal
~{N}-[(10~{S})-3,4,5-trimethoxy-16-methylidene-14-oxatetracyclo[9.7.0.0^{2,7}.0^{13,17}]octadeca-1(18),2,4,6,11,13(17)-hexaen-10-yl]ethanamide

Pfam Families

PF03953Tubulin_C

Tubulin C-terminal domain

ClanCL0442Tubulin_C

External Links

ECOD PDB View: 6TDE RCSB PDB: 6TDE PDBe: 6TDE UniProt: D0VWY9

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.