ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6u6cA1 - ECOD Domain | ECOD

ECOD/Domains/e6u6cA1

e6u6cA1

UID: 002652017

PDB

Range: A:8-267
PDB: 6U6C chain A(all domains)
UniProt: P9WFY1 (all domains)
Gene: trpA

Molecule: Tryptophan synthase alpha chain

3D Structure

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Related Domains

Browse other domains in Trp_syntA →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyTrp_syntA(2002.1.1.15)

Ligands

in contact, ≤ 4 Å

AlanineALA
drugDrugBank DB00160within 5 Å only
1-(2-fluorobenzene-1-carbonyl)-N-methyl-2,3-dihydro-1H-indole-5-sulfonamidePZV

+ 4 additives (Acetate, Formic acid, Malonate Ion, …)

Pfam Families

PF00290Trp_syntA

Tryptophan synthase alpha chain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 6U6C RCSB PDB: 6U6C PDBe: 6U6C UniProt: P9WFY1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

AcetateACT

DrugBank DB14511

Formic acidFMT

DrugBank DB01942

Malonate IonMLI

DrugBank DB02201

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.