ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6ubsD2 - ECOD Domain | ECOD

ECOD/Domains/e6ubsD2

e6ubsD2

UID: 002652092

PDB

Range: D:244-336,D:401-444
PDB: 6UBS chain D(all domains)
UniProt: O93430 (all domains)
Gene: glra1

Molecule: Glycine receptor subunit alphaZ1

3D Structure

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Related Domains

Browse other domains in Neur_chan_memb →

Classification

AArchitecturealpha bundles(a.7)

XX-groupNeurotransmitter-gated ion-channel transmembrane pore(5057)

HH-groupNeurotransmitter-gated ion-channel transmembrane pore(5057.1)

TT-groupNeurotransmitter-gated ion-channel transmembrane pore(5057.1.1)

FFamilyNeur_chan_memb(5057.1.1.1)

Ligands

in contact, ≤ 4 Å

[(2R)-2-octanoyloxy-3-[oxidanyl-[(1R,2R,3S,4R,5R,6S)-2,3,6-tris(oxidanyl)-4,5-diphosphonooxy-cyclohexyl]oxy-phosphoryl]oxy-propyl] octanoatePIO
1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINEPX4

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02932Neur_chan_memb

Neurotransmitter-gated ion-channel transmembrane region

ClanCL0975NLGIC_TM

External Links

ECOD PDB View: 6UBS RCSB PDB: 6UBS PDBe: 6UBS UniProt: O93430

Downloads

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