ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6vc7D1 - ECOD Domain | ECOD

ECOD/Domains/e6vc7D1

e6vc7D1

UID: 002652995

PDB

Range: D:243-586
PDB: 6VC7 chain D(all domains)
UniProt: P40709 (all domains)
Gene: pbgA

Molecule: Periplasmic domain of the cardiolipin transporter protein YejM/PbgA

3D Structure

Loading viewer...

Related Domains

Browse other domains in Sulfatase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupAlkaline phosphatase-like(7515)

HH-groupAlkaline phosphatase-like(7515.1)

TT-groupAlkaline phosphatase-like(7515.1.1)

FFamilySulfatase(7515.1.1.2)

Ligands

in contact, ≤ 4 Å

EthanolamineETA
drugDrugBank DB03994
Potassium ionK
metal
Magnesium ionMG

Pfam Families

PF00884Sulfatase

Sulfatase

ClanCL0088Alk_phosphatase

External Links

ECOD PDB View: 6VC7 RCSB PDB: 6VC7 PDBe: 6VC7 UniProt: P40709

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

+ 3 additives (Pentaethylene glycol, 1,2-ETHANEDIOL, Tetraethylene glycol)

Pentaethylene glycol1PE
1,2-ETHANEDIOLEDO
Tetraethylene glycolPG4

Shown in the structure viewer. Drug annotations from DrugDomain.