ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6vimB1 - ECOD Domain | ECOD

ECOD/Domains/e6vimB1

e6vimB1

UID: 002653090

PDB

Range: B:3-132
PDB: 6VIM chain B(all domains)
UniProt: P11444 (all domains)
Gene: mdlA

Molecule: Mandelate racemase

3D Structure

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Related Domains

Browse other domains in MR_MLE_N →

Classification

AArchitecturea+b two layers(a.11)

XX-groupEnolase-N/ribosomal protein(218)

HH-groupEnolase N-terminal domain-like(218.1)

TT-groupEnolase N-terminal domain-like(218.1.1)

FFamilyMR_MLE_N(218.1.1.1)

Ligands

in contact, ≤ 4 Å

Phenylboronic acidPBC
drugDrugBank DB01795

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02746MR_MLE_N

Mandelate racemase / muconate lactonizing enzyme, N-terminal domain

ClanCL0227Enolase_N

External Links

ECOD PDB View: 6VIM RCSB PDB: 6VIM PDBe: 6VIM UniProt: P11444

Downloads

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