ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6vimE1 - ECOD Domain | ECOD

ECOD/Domains/e6vimE1

e6vimE1

UID: 002653096

PDB

Range: E:3-132
PDB: 6VIM chain E(all domains)
UniProt: P11444 (all domains)
Gene: mdlA

Molecule: Mandelate racemase

3D Structure

Loading viewer...

Related Domains

Browse other domains in MR_MLE_N →

Classification

AArchitecturea+b two layers(a.11)

XX-groupEnolase-N/ribosomal protein(218)

HH-groupEnolase N-terminal domain-like(218.1)

TT-groupEnolase N-terminal domain-like(218.1.1)

FFamilyMR_MLE_N(218.1.1.1)

Ligands

in contact, ≤ 4 Å

Phenylboronic acidPBC
drugDrugBank DB01795

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02746MR_MLE_N

Mandelate racemase / muconate lactonizing enzyme, N-terminal domain

ClanCL0227Enolase_N

External Links

ECOD PDB View: 6VIM RCSB PDB: 6VIM PDBe: 6VIM UniProt: P11444

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure