ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6vmiAB1 - ECOD Domain | ECOD

ECOD/Domains/e6vmiAB1

e6vmiAB1

UID: 002653386

PDB

Range: AB:56-275
PDB: 6VMI chain AB(all domains)
UniProt: Q9Y399 (all domains)
Gene: MRPS2

Molecule: 28S ribosomal protein S2, mitochondrial

3D Structure

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Related Domains

Browse other domains in Ribosomal_S2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupRibosomal protein S2/SIS domain(2007.6)

TT-groupRibosomal protein S2/SIS domain(2007.6.1)

FFamilyRibosomal_S2(2007.6.1.1)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00318Ribosomal_S2

Ribosomal protein S2

ClanCL0067SIS

External Links

ECOD PDB View: 6VMI RCSB PDB: 6VMI PDBe: 6VMI UniProt: Q9Y399

Downloads

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