ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6vmiAP1 - ECOD Domain | ECOD

ECOD/Domains/e6vmiAP1

e6vmiAP1

UID: 002653395

PDB

Range: AP:47-142
PDB: 6VMI chain AP(all domains)
UniProt: Q9Y3D5 (all domains)
Gene: MRPS18C

Molecule: 28S ribosomal protein S18c, mitochondrial

3D Structure

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Related Domains

Browse other domains in Ribosomal_S18 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupThree-helical HTH(101.1.1)

FFamilyRibosomal_S18(101.1.1.7)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01084Ribosomal_S18

Ribosomal protein S18

ClanCL0123HTH

External Links

ECOD PDB View: 6VMI RCSB PDB: 6VMI PDBe: 6VMI UniProt: Q9Y3D5

Downloads

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