ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6vpcE1 - ECOD Domain | ECOD

ECOD/Domains/e6vpcE1

e6vpcE1

UID: 002653785

PDB

Range: E:5-149
PDB: 6VPC chain E(all domains)
UniProt: P68398 (all domains)
Gene: tadA

Molecule: t-RNA adenine deaminase A v8e (TadA-8e)

3D Structure

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Related Domains

Browse other domains in dCMP_cyt_deam_1 →

Classification

AArchitecturea+b three layers(a.12)

XX-groupCytidine deaminase-like(2492)

HH-groupCytidine deaminase-like(2492.1)

TT-groupCytidine deaminase-like(2492.1.1)

FFamilydCMP_cyt_deam_1(2492.1.1.1)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00383dCMP_cyt_deam_1

Cytidine and deoxycytidylate deaminase zinc-binding region

ClanCL0109CDA

External Links

ECOD PDB View: 6VPC RCSB PDB: 6VPC PDBe: 6VPC UniProt: P68398

Downloads

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