ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6whtD2 - ECOD Domain | ECOD

ECOD/Domains/e6whtD2

e6whtD2

UID: 002655543

PDB

Range: D:540-569,D:602-659,D:821-838
PDB: 6WHT chain D(all domains)
UniProt: Q00960 (all domains)
Gene: Grin2b

Molecule: Glutamate receptor ionotropic, NMDA 2B

3D Structure

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Related Domains

Browse other domains in Lig_chan →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupVoltage-gated ion channels(5054)

HH-groupVoltage-gated ion channels(5054.1)

TT-groupVoltage-gated ion channels(5054.1.1)

FFamilyLig_chan(5054.1.1.1)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00060Lig_chan

Ligand-gated ion channel

ClanCL0030Ion_channel

External Links

ECOD PDB View: 6WHT RCSB PDB: 6WHT PDBe: 6WHT UniProt: Q00960

Downloads

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