ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6wnjB1 - ECOD Domain | ECOD

ECOD/Domains/e6wnjB1

e6wnjB1

UID: 002655734

PDB

Range: B:1-133
PDB: 6WNJ chain B(all domains)
UniProt: P50120 (all domains)
Gene: RBP2

Molecule: Retinol-binding protein 2

3D Structure

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Related Domains

Browse other domains in Lipocalin →

Classification

AArchitecturebeta barrels(a.1)

XX-groupLipocalins/Streptavidin(9)

HH-groupLipocalins(9.1)

TT-groupLipocalins(9.1.1)

FFamilyLipocalin(9.1.1.1)

Ligands

in contact, ≤ 4 Å

Tris-Hydroxymethyl-Methyl-Ammonium144
drugDrugBank DB03570

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL
DrugBank DB09462

Pfam Families

PF00061Lipocalin

Lipocalin / cytosolic fatty-acid binding protein family

ClanCL0116Calycin

External Links

ECOD PDB View: 6WNJ RCSB PDB: 6WNJ PDBe: 6WNJ UniProt: P50120

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sulfate ionSO4

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.