ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6ww4A1 - ECOD Domain | ECOD

ECOD/Domains/e6ww4A1

e6ww4A1

UID: 002655916

PDB

Range: A:1-2751
PDB: 6WW4 chain A(all domains)
UniProt: P68431 (all domains)
Gene: H3C1

Molecule: Histone H3.1,E3 ubiquitin-protein ligase HERC2

3D Structure

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Related Domains

Browse other domains in ZZ →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupRING/U-box(376.1.1)

FFamilyZZ(376.1.1.3)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Zinc finger, ZZ type

ClanCL0229RING

External Links

ECOD PDB View: 6WW4 RCSB PDB: 6WW4 PDBe: 6WW4 UniProt: P68431

Downloads

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