ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6znvA1 - ECOD Domain | ECOD

ECOD/Domains/e6znvA1

e6znvA1

UID: 002660913

PDB

Range: A:177-291
PDB: 6ZNV chain A(all domains)
UniProt: Q86U86 (all domains)
Gene: PBRM1

Molecule: Protein polybromo-1

3D Structure

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Related Domains

Browse other domains in Bromodomain →

Classification

AArchitecturealpha bundles(a.7)

XX-groupBromodomain-like(633)

HH-groupBromodomain(633.1)

TT-groupBromodomain(633.1.1)

FFamilyBromodomain(633.1.1.1)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
1-[3-azanyl-6-(2-hydroxyphenyl)pyridazin-4-yl]piperidin-4-olQMW
Zinc ionZN

Pfam Families

PF00439Bromodomain

Bromodomain

External Links

ECOD PDB View: 6ZNV RCSB PDB: 6ZNV PDBe: 6ZNV UniProt: Q86U86

Downloads

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metal

+ 2 additives (Acetate, 1,2-ETHANEDIOL)

AcetateACT
DrugBank DB14511
1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.