ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2fmmD1 - ECOD Domain | ECOD

ECOD/Domains/e2fmmD1

e2fmmD1

UID: 000026628

PDB

Range: D:110-175
PDB: 2FMM chain D(all domains)
UniProt: P83916 (all domains)
Gene: CBX1

Molecule: Chromobox protein homolog 1

3D Structure

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Related Domains

Browse other domains in Chromo_shadow →

Classification

AArchitecturebeta barrels(a.1)

XX-groupSH3(4)

HH-groupChromo domain-like(4.8)

TT-groupChromo domain-like(4.8.1)

FFamilyChromo_shadow(4.8.1.2)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01393Chromo_shadow

Chromo shadow domain

ClanCL0010SH3

External Links

ECOD PDB View: 2FMM RCSB PDB: 2FMM PDBe: 2FMM UniProt: P83916

Downloads

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