ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6ukdA1 - ECOD Domain | ECOD

ECOD/Domains/e6ukdA1

e6ukdA1

UID: 002663673

PDB

Range: A:146-402
PDB: 6UKD chain A(all domains)
UniProt: P0C0J0 (all domains)
Gene: speB

Molecule: Streptopain

3D Structure

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Related Domains

Browse other domains in Peptidase_C10 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyPeptidase_C10(219.1.1.10)

Ligands

in contact, ≤ 4 Å

benzyl [(2S)-1-(3-nitrophenyl)-3-oxobutan-2-yl]carbamateQ9D

+ 1 additive (Nitrate)

NitrateNO3
DrugBank DB14049

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01640Peptidase_C10

Peptidase C10 family

ClanCL0125Peptidase_CA

External Links

ECOD PDB View: 6UKD RCSB PDB: 6UKD PDBe: 6UKD UniProt: P0C0J0

Downloads

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