ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6x6hC1 - ECOD Domain | ECOD

ECOD/Domains/e6x6hC1

e6x6hC1

UID: 002663798

PDB

Range: C:1-70
PDB: 6X6H chain C(all domains)
UniProt: Q7DJJ2 (all domains)
Gene: stxII

Molecule: Shiga toxin 2 B subunit

3D Structure

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Related Domains

Browse other domains in SLT_beta →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupBacterial enterotoxins(2.2)

TT-groupBacterial enterotoxins(2.2.1)

FFamilySLT_beta(2.2.1.3)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
within 5 Å only

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02258SLT_beta

Shiga-like toxin beta subunit

ClanCL0658OB_enterotoxin

External Links

ECOD PDB View: 6X6H RCSB PDB: 6X6H PDBe: 6X6H UniProt: Q7DJJ2

Downloads

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