ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6ycqA2 - ECOD Domain | ECOD

ECOD/Domains/e6ycqA2

e6ycqA2

UID: 002663850

PDB

Range: A:119-226
PDB: 6YCQ chain A(all domains)
UniProt: Q8L7G0 (all domains)
Gene: ARF1

Molecule: Auxin response factor 1

3D Structure

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Related Domains

Browse other domains in B3 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupType II restriction endonuclease effector domain(1.1.11)

FFamilyB3(1.1.11.1)

Ligands

in contact, ≤ 4 Å

Chloride ionCL

+ 2 additives (Formic acid, Tromethamine)

Formic acidFMT
DrugBank DB01942
TromethamineTRS

Pfam Families

B3 DNA binding domain

ClanCL0405DNA_b-psBarrel

External Links

ECOD PDB View: 6YCQ RCSB PDB: 6YCQ PDBe: 6YCQ UniProt: Q8L7G0

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB03754

Shown in the structure viewer. Drug annotations from DrugDomain.