ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6yemA1 - ECOD Domain | ECOD

ECOD/Domains/e6yemA1

e6yemA1

UID: 002663855

PDB

Range: A:-1-196
PDB: 6YEM chain A(all domains)
UniProt: C3W5X6 (all domains)
Gene: PA

Molecule: Polymerase acidic protein,Polymerase acidic protein

3D Structure

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Related Domains

Browse other domains in Flu_PA →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRestriction endonuclease-like(2008)

HH-groupRestriction endonuclease-like(2008.1)

TT-groupRestriction endonuclease-like(2008.1.1)

FFamilyFlu_PA(2008.1.1.1)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
MANGANESE (II) IONMN
metal
3,5,6,8-tetrakis(oxidanyl)-2-pentanoyl-naphthalene-1,4-dioneOOH

Pfam Families

Influenza RNA-dependent RNA polymerase subunit PA

ClanCL0236PDDEXK

External Links

ECOD PDB View: 6YEM RCSB PDB: 6YEM PDBe: 6YEM UniProt: C3W5X6

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Magnesium ionMG

metalwithin 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.