ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7c67A2 - ECOD Domain | ECOD

ECOD/Domains/e7c67A2

e7c67A2

UID: 002665142

PDB

Range: A:1-116,A:297-417
PDB: 7C67 chain A(all domains)
UniProt: Q53W80 (all domains)
Gene: TTHB082

Molecule: Sugar ABC transporter, periplasmic sugar-binding protein

3D Structure

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Related Domains

Browse other domains in Bacterial extracellular solute-binding protein / Bacterial extracellular solute-binding protein →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyBacterial extracellular solute-binding protein / Bacterial extracellular solute-binding protein(7523.1.1.9)

Ligands

in contact, ≤ 4 Å

Sulfur dioxideSO2
drugDrugBank DB16426
Chloride ionCL

+ 2 additives (Sulfate ion, 1,2-ETHANEDIOL)

Sulfate ionSO4

Pfam Families

PF01547SBP_bac_1

Bacterial extracellular solute-binding protein

ClanCL0177PBP

PF13416SBP_bac_8

Bacterial extracellular solute-binding protein

ClanCL0177PBP

External Links

ECOD PDB View: 7C67 RCSB PDB: 7C67 PDBe: 7C67 UniProt: Q53W80

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.