ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7c6wA1 - ECOD Domain | ECOD

ECOD/Domains/e7c6wA1

e7c6wA1

UID: 002665193

PDB

Range: A:117-295
PDB: 7C6W chain A(all domains)
UniProt: Q53W80 (all domains)
Gene: TTHB082

Molecule: Sugar ABC transporter, periplasmic sugar-binding protein

3D Structure

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Related Domains

Browse other domains in SBP_bac_1 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilySBP_bac_1(7523.1.1.8)

Ligands

in contact, ≤ 4 Å

Sulfur dioxideSO2
drugDrugBank DB16426
Chloride ionCL

+ 3 additives (Carbonate ion, Phosphate ion, 1,2-ETHANEDIOL)

Carbonate ion

Pfam Families

PF01547SBP_bac_1

Bacterial extracellular solute-binding protein

ClanCL0177PBP

External Links

ECOD PDB View: 7C6W RCSB PDB: 7C6W PDBe: 7C6W UniProt: Q53W80

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14531

Phosphate ionPO4

DrugBank DB14523

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.