ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7c8fB1 - ECOD Domain | ECOD

ECOD/Domains/e7c8fB1

e7c8fB1

UID: 002665242

PDB

Range: B:2-267
PDB: 7C8F chain B(all domains)

Molecule: H127A/Y244A mutant of alginate lyase AlyC3 in complex with dimannuronate

3D Structure

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Related Domains

Browse other domains in Alginate_lyase2 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupConcanavalin A-like(10.1)

TT-groupConcanavalin A-like lectins/glucanases(10.1.1)

FFamilyAlginate_lyase2(10.1.1.27)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Malonate Ion)

Malonate IonMLI
DrugBank DB02201

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF08787Alginate_lyase2

Alginate lyase

ClanCL0004Concanavalin

External Links

ECOD PDB View: 7C8F RCSB PDB: 7C8F PDBe: 7C8F

Downloads

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