ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6lc5A1 - ECOD Domain | ECOD

ECOD/Domains/e6lc5A1

e6lc5A1

UID: 002667597

PDB

Range: A:0-388
PDB: 6LC5 chain A(all domains)
UniProt: Q9XEI3 (all domains)
Gene: LOC123452238

Molecule: Beta-D-glucan exohydrolase isoenzyme ExoI

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_3 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyGlyco_hydro_3(2002.1.1.39)

Ligands

in contact, ≤ 4 Å

(2~{R},3~{S},4~{S},5~{R},6~{R})-6-(hydroxymethyl)-4-[(2~{S},3~{R},4~{S},5~{S},6~{R})-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]sulfanyl-oxane-2,3,5-triol6BV

+ 5 additives (Acetate, HEPES, Glycerin, …)

AcetateACT
DrugBank DB14511

Pfam Families

PF00933Glyco_hydro_3

Glycosyl hydrolase family 3 N terminal domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 6LC5 RCSB PDB: 6LC5 PDBe: 6LC5 UniProt: Q9XEI3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

HEPES

DrugBank DB16872

GlycerinGOL

DrugBank DB09462

Sulfate ionSO4

DrugBank DB14546

Pentaethylene glycol1PE

Shown in the structure viewer. Drug annotations from DrugDomain.