ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6o8x31 - ECOD Domain | ECOD

ECOD/Domains/e6o8x31

e6o8x31

UID: 002669166

PDB

Range: 3:1-49
PDB: 6O8X chain 3(all domains)
UniProt: A0A1B4XR98 (all domains)
Gene: rpmG

Molecule: 50S ribosomal protein L33

3D Structure

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Related Domains

Browse other domains in Ribosomal_L33 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupRubredoxin-related(375.1)

TT-groupRubredoxin-related(375.1.1)

FFamilyRibosomal_L33(375.1.1.3)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00471Ribosomal_L33

Ribosomal protein L33

ClanCL0167Zn_Beta_Ribbon

External Links

ECOD PDB View: 6O8X RCSB PDB: 6O8X PDBe: 6O8X UniProt: A0A1B4XR98

Downloads

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