ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6q1sC1 - ECOD Domain | ECOD

ECOD/Domains/e6q1sC1

e6q1sC1

UID: 002669646

PDB

Range: C:0-117
PDB: 6Q1S chain C(all domains)
UniProt: Q79FW0 (all domains)
Gene: Rv0812

Molecule: Probable amino acid aminotransferase

3D Structure

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Related Domains

Browse other domains in Aminotran_4 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupa+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes(4020)

HH-groupa+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes(4020.1)

TT-groupa+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes(4020.1.1)

FFamilyAminotran_4(4020.1.1.1)

Ligands

in contact, ≤ 4 Å

Oxogluric acidAKG
drugDrugBank DB08845
Pyridoxamine-5'-PhosphatePMP
drugDrugBank DB02142

Shown in the structure viewer.

Pfam Families

PF01063Aminotran_4

Amino-transferase class IV

External Links

ECOD PDB View: 6Q1S RCSB PDB: 6Q1S PDBe: 6Q1S UniProt: Q79FW0

Downloads

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Drug annotations from DrugDomain.