ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6t5mB1 - ECOD Domain | ECOD

ECOD/Domains/e6t5mB1

e6t5mB1

UID: 002670766

PDB

Range: B:6-292
PDB: 6T5M chain B(all domains)
UniProt: Q9I5E2 (all domains)
Gene: prpB

Molecule: 2-methylisocitrate lyase

3D Structure

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Related Domains

Browse other domains in PEP_mutase →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyPEP_mutase(2002.1.1.176)

Ligands

in contact, ≤ 4 Å

Pyruvic acidPYR
drugDrugBank DB00119
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF13714PEP_mutase

Phosphoenolpyruvate phosphomutase

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 6T5M RCSB PDB: 6T5M PDBe: 6T5M UniProt: Q9I5E2

Downloads

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