ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6trdm1 - ECOD Domain | ECOD

ECOD/Domains/e6trdm1

e6trdm1

UID: 002671269

PDB

Range: m:1-31
PDB: 6TRD chain m(all domains)
UniProt: P0A403 (all domains)
Gene: psaM

Molecule: Photosystem I reaction center subunit XII

3D Structure

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Related Domains

Browse other domains in PsaM →

Classification

AArchitectureextended segments(a.20)

XX-groupSubunit XII of photosystem I reaction centre, PsaM(5022)

HH-groupSubunit XII of photosystem I reaction centre, PsaM(5022.1)

TT-groupSubunit XII of photosystem I reaction centre, PsaM(5022.1.1)

FFamilyPsaM(5022.1.1.1)

Ligands

in contact, ≤ 4 Å

Beta caroteneBCR
drugDrugBank DB06755
Chlorophyll ACLA
drugDrugBank DB02133
1,2-Dipalmitoyl-Phosphatidyl-Glycerole

Pfam Families

Photosystem I protein M (PsaM)

External Links

ECOD PDB View: 6TRD RCSB PDB: 6TRD PDBe: 6TRD UniProt: P0A403

Downloads

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drugDrugBank DB02043

Shown in the structure viewer. Drug annotations from DrugDomain.