ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6uboB1 - ECOD Domain | ECOD

ECOD/Domains/e6uboB1

e6uboB1

UID: 002671517

PDB

Range: B:19-177
PDB: 6UBO chain B(all domains)
UniProt: P0A901 (all domains)
Gene: blc

Molecule: Outer membrane lipoprotein Blc

3D Structure

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Related Domains

Browse other domains in Lipocalin_2 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupLipocalins/Streptavidin(9)

HH-groupLipocalins(9.1)

TT-groupLipocalins(9.1.1)

FFamilyLipocalin_2(9.1.1.11)

Ligands

in contact, ≤ 4 Å

polyethylene glycolP4K
12-(diethylamino)-2,2-bis(fluoranyl)-4,5-dimethyl-5-aza-3-azonia-2-boranuidatricyclo[7.4.0.0^{3,7}]trideca-1(13),3,7,9,11-pentaen-6-oneQ3J

+ 1 additive (Citric acid)

Citric acidCIT

Pfam Families

PF08212Lipocalin_2

Lipocalin-like domain

ClanCL0116Calycin

External Links

ECOD PDB View: 6UBO RCSB PDB: 6UBO PDBe: 6UBO UniProt: P0A901

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB04272

Shown in the structure viewer. Drug annotations from DrugDomain.