ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6ubvA1 - ECOD Domain | ECOD

ECOD/Domains/e6ubvA1

e6ubvA1

UID: 002671520

PDB

Range: A:452-843
PDB: 6UBV chain A(all domains)
UniProt: P11657 (all domains)
Gene: pac

Molecule: Surface protein adhesin

3D Structure

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Related Domains

Browse other domains in Streptococcal surface antigen repeat / Glucan-binding protein C →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupGlycosyl hydrolase domain-like(12)

HH-groupV-region of surface antigen I/II (SA I/II, PAC)(12.4)

TT-groupV-region of surface antigen I/II (SA I/II, PAC)(12.4.1)

FFamilyStreptococcal surface antigen repeat / Glucan-binding protein C(12.4.1.1)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
Sodium ionNA
metal
N-(3,4-dihydroxyphenyl)-N'-[2-(3,4-dihydroxyphenyl)ethyl]ureaSNZ

Pfam Families

PF06696Strep_SA_rep

Streptococcal surface antigen repeat

Glucan-binding protein C

External Links

ECOD PDB View: 6UBV RCSB PDB: 6UBV PDBe: 6UBV UniProt: P11657

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.