ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6ubvD1 - ECOD Domain | ECOD

ECOD/Domains/e6ubvD1

e6ubvD1

UID: 002671523

PDB

Range: D:457-844
PDB: 6UBV chain D(all domains)
UniProt: P11657 (all domains)
Gene: pac

Molecule: Surface protein adhesin

3D Structure

Loading viewer...

Related Domains

Browse other domains in GbpC →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupGlycosyl hydrolase domain-like(12)

HH-groupV-region of surface antigen I/II (SA I/II, PAC)(12.4)

TT-groupV-region of surface antigen I/II (SA I/II, PAC)(12.4.1)

FFamilyGbpC(12.4.1.2)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
Sodium ionNA
metal
N-(3,4-dihydroxyphenyl)-N'-[2-(3,4-dihydroxyphenyl)ethyl]ureaSNZ

Pfam Families

Glucan-binding protein C

External Links

ECOD PDB View: 6UBV RCSB PDB: 6UBV PDBe: 6UBV UniProt: P11657

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 2 additives (Sulfate ion, 1,2-ETHANEDIOL)

Sulfate ionSO4
DrugBank DB14546
1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.