ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6vejC1 - ECOD Domain | ECOD

ECOD/Domains/e6vejC1

e6vejC1

UID: 002672273

PDB

Range: C:45-142
PDB: 6VEJ chain C(all domains)
UniProt: Q9I6X4 (all domains)
Gene: PA0158

Molecule: Probable Resistance-Nodulation-Cell Division (RND) efflux transporter

3D Structure

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Related Domains

Browse other domains in ACR_tran →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupFerredoxin domains in multidrug efflux transporter(304.28)

TT-groupMultidrug efflux transporter AcrB pore domain(304.28.1)

FFamilyACR_tran(304.28.1.1)

Ligands

in contact, ≤ 4 Å

Dodecyl-Alpha-D-MaltosideLMU
drugDrugBank DB03279within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00873ACR_tran

AcrB/AcrD/AcrF family

ClanCL0322RND_permease

External Links

ECOD PDB View: 6VEJ RCSB PDB: 6VEJ PDBe: 6VEJ UniProt: Q9I6X4

Downloads

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