ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6w13A2 - ECOD Domain | ECOD

ECOD/Domains/e6w13A2

e6w13A2

UID: 002672572

PDB

Range: A:136-324
PDB: 6W13 chain A(all domains)
UniProt: O15527 (all domains)
Gene: OGG1

Molecule: N-glycosylase/DNA lyase

3D Structure

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Related Domains

Browse other domains in HhH-GPD →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHhH/H2TH(102)

HH-groupSAM/DNA-glycosylase(102.1)

TT-groupDNA-glycosylase(102.1.2)

FFamilyHhH-GPD(102.1.2.1)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal
2-(2-ethoxyethoxy)ethanethiolS5Y

+ 1 additive (Acetate)

AcetateACT

Pfam Families

PF00730HhH-GPD

HhH-GPD superfamily base excision DNA repair protein

ClanCL0198HHH

External Links

ECOD PDB View: 6W13 RCSB PDB: 6W13 PDBe: 6W13 UniProt: O15527

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14511

Shown in the structure viewer. Drug annotations from DrugDomain.