ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6w5hD1 - ECOD Domain | ECOD

ECOD/Domains/e6w5hD1

e6w5hD1

UID: 002672610

PDB

Range: D:0-173
PDB: 6W5H chain D(all domains)
UniProt: Q83883 (all domains)
Gene: ORF1

Molecule: 3C-LIKE PROTEASE

3D Structure

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Related Domains

Browse other domains in Peptidase_C37 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel(1.1.5)

FFamilyPeptidase_C37(1.1.5.20)

Ligands

in contact, ≤ 4 Å

2-(3-chlorophenyl)-2-methylpropyl [(2S)-3-cyclohexyl-1-({(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}amino)-1-oxopropan-2-yl]carbamateTKP

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF05416Peptidase_C37

Southampton virus-type processing peptidase

ClanCL0124Peptidase_PA

External Links

ECOD PDB View: 6W5H RCSB PDB: 6W5H PDBe: 6W5H UniProt: Q83883

Downloads

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