ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6widA2 - ECOD Domain | ECOD

ECOD/Domains/e6widA2

e6widA2

UID: 002673027

PDB

Range: A:229-288
PDB: 6WID chain A(all domains)
UniProt: Q9NP87 (all domains)
Gene: POLM

Molecule: DNA-directed DNA/RNA polymerase mu

3D Structure

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Related Domains

Browse other domains in DNA_pol_lambd_f →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHhH/H2TH(102)

HH-groupSAM/DNA-glycosylase(102.1)

TT-groupSAM domain-like(102.1.1)

FFamilyDNA_pol_lambd_f(102.1.1.21)

Ligands

in contact, ≤ 4 Å

Sodium ionNA
metal

+ 2 additives (Glycerin, Pentaethylene glycol)

GlycerinGOL
DrugBank DB09462
Pentaethylene glycol1PE

Pfam Families

PF10391DNA_pol_lambd_f

Fingers domain of DNA polymerase lambda

ClanCL0198HHH

External Links

ECOD PDB View: 6WID RCSB PDB: 6WID PDBe: 6WID UniProt: Q9NP87

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.