ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6wydE1 - ECOD Domain | ECOD

ECOD/Domains/e6wydE1

e6wydE1

UID: 002673360

PDB

Range: E:113-577
PDB: 6WYD chain E(all domains)
UniProt: P05164 (all domains)
Gene: MPO

Molecule: Myeloperoxidase heavy chain

3D Structure

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Related Domains

Browse other domains in An_peroxidase →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupHeme-dependent peroxidases(136)

HH-groupHeme-dependent peroxidases(136.1)

TT-groupHeme-dependent peroxidases(136.1.1)

FFamilyAn_peroxidase(136.1.1.3)

Ligands

in contact, ≤ 4 Å

alpha-L-fucoseFUC
drugDrugBank DB04473
Ferroheme CHEC
drugDrugBank DB03317
N-Acetylglucosamine

Pfam Families

PF03098An_peroxidase

Animal haem peroxidase

ClanCL0617Peroxidase

External Links

ECOD PDB View: 6WYD RCSB PDB: 6WYD PDBe: 6WYD UniProt: P05164

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

drugDrugBank DB00141

7-benzyl-1H-[1,2,3]triazolo[4,5-b]pyridin-5-amine7GD

beta-D-mannopyranoseBMA

Calcium ionCA

metal

Chloride ionCL

alpha-D-mannopyranoseMAN

Shown in the structure viewer. Drug annotations from DrugDomain.