ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6xj9A1 - ECOD Domain | ECOD

ECOD/Domains/e6xj9A1

e6xj9A1

UID: 002673967

PDB

Range: A:46-233
PDB: 6XJ9 chain A(all domains)
UniProt: A0A5B0UCF9 (all domains)

Molecule: Agarase

3D Structure

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Related Domains

Browse other domains in Agarase_CBM →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupGalactose-binding domain-like(10.32)

TT-groupGalactose-binding domain-like(10.32.1)

FFamilyAgarase_CBM(10.32.1.167)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF17992Agarase_CBM

Agarase CBM like domain

ClanCL0202GBD

External Links

ECOD PDB View: 6XJ9 RCSB PDB: 6XJ9 PDBe: 6XJ9 UniProt: A0A5B0UCF9

Downloads

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