ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6xjhD1 - ECOD Domain | ECOD

ECOD/Domains/e6xjhD1

e6xjhD1

UID: 002673986

PDB

Range: D:1-204,D:276-290
PDB: 6XJH chain D(all domains)
UniProt: X5EJW5 (all domains)
Gene: ybhF_2

Molecule: ABC transporter ATP-binding protein

3D Structure

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Related Domains

Browse other domains in ABC_tran →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyABC_tran(2004.1.1.5)

Ligands

in contact, ≤ 4 Å

Adenosine 5'-[gamma-thio]triphosphateAGS
drugDrugBank DB02930
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00005ABC_tran

ABC transporter

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 6XJH RCSB PDB: 6XJH PDBe: 6XJH UniProt: X5EJW5

Downloads

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