ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6y5pA1 - ECOD Domain | ECOD

ECOD/Domains/e6y5pA1

e6y5pA1

UID: 002674406

PDB

Range: A:388-489
PDB: 6Y5P chain A(all domains)
UniProt: Q86Y01 (all domains)
Gene: DTX1

Molecule: E3 ubiquitin-protein ligase DTX1

3D Structure

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Related Domains

Browse other domains in zf-C3HC4 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupRING/U-box(376.1.1)

FFamilyzf-C3HC4(376.1.1.1)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00097zf-C3HC4

Zinc finger, C3HC4 type (RING finger)

ClanCL0229RING

External Links

ECOD PDB View: 6Y5P RCSB PDB: 6Y5P PDBe: 6Y5P UniProt: Q86Y01

Downloads

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