ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6y5pA2 - ECOD Domain | ECOD

ECOD/Domains/e6y5pA2

e6y5pA2

UID: 002674407

PDB

Range: A:478-615
PDB: 6Y5P chain A(all domains)
UniProt: Q86Y01 (all domains)
Gene: DTX1

Molecule: E3 ubiquitin-protein ligase DTX1

3D Structure

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Related Domains

Browse other domains in DTC →

Classification

AArchitecturea+b two layers(a.11)

XX-groupCarboxyl terminal domain of human deltex 3-like(3169)

HH-groupCarboxyl terminal domain of human deltex 3-like(3169.1)

TT-groupCarboxyl terminal domain of human deltex 3-like(3169.1.1)

FFamilyDTC(3169.1.1.1)

Ligands

in contact, ≤ 4 Å

NadideNAD
drugDrugBank DB14128
Zinc ionZN
metalwithin 5 Å only

+ 1 additive (1,2-ETHANEDIOL)

Pfam Families

Deltex C-terminal domain

External Links

ECOD PDB View: 6Y5P RCSB PDB: 6Y5P PDBe: 6Y5P UniProt: Q86Y01

Downloads

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1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.