ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6y88A1 - ECOD Domain | ECOD

ECOD/Domains/e6y88A1

e6y88A1

UID: 002674464

PDB

Range: A:3-266
PDB: 6Y88 chain A(all domains)
UniProt: P20577 (all domains)
Gene: trpC

Molecule: Indole-3-glycerol phosphate synthase

3D Structure

Loading viewer...

Related Domains

Browse other domains in IGPS →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyIGPS(2002.1.1.10)

Ligands

in contact, ≤ 4 Å

1-(O-Carboxy-Phenylamino)-1-Deoxy-D-Ribulose-5-Phosphate137
drugDrugBank DB03543

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Pfam Families

Indole-3-glycerol phosphate synthase

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 6Y88 RCSB PDB: 6Y88 PDBe: 6Y88 UniProt: P20577

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Shown in the structure viewer. Drug annotations from DrugDomain.