ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6y88E1 - ECOD Domain | ECOD

ECOD/Domains/e6y88E1

e6y88E1

UID: 002674468

PDB

Range: E:2-266
PDB: 6Y88 chain E(all domains)
UniProt: P20577 (all domains)
Gene: trpC

Molecule: Indole-3-glycerol phosphate synthase

3D Structure

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Related Domains

Browse other domains in IGPS →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyIGPS(2002.1.1.10)

Ligands

in contact, ≤ 4 Å

1-(O-Carboxy-Phenylamino)-1-Deoxy-D-Ribulose-5-Phosphate137
drugDrugBank DB03543

+ 2 additives (Citric acid, Glycerin)

Citric acidCIT
DrugBank DB04272

Pfam Families

Indole-3-glycerol phosphate synthase

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 6Y88 RCSB PDB: 6Y88 PDBe: 6Y88 UniProt: P20577

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

GlycerinGOL

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.