ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6ybqC1 - ECOD Domain | ECOD

ECOD/Domains/e6ybqC1

e6ybqC1

UID: 002674566

PDB

Range: C:5-251
PDB: 6YBQ chain C(all domains)
UniProt: C5AP75 (all domains)
Gene: pccB

Molecule: Propionyl-CoA carboxylase beta chain

3D Structure

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Related Domains

Browse other domains in Carboxyl_trans →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupClpP/crotonase(2486)

HH-groupClpP/crotonase(2486.1)

TT-groupClpP/crotonase(2486.1.1)

FFamilyCarboxyl_trans(2486.1.1.3)

Ligands

in contact, ≤ 4 Å

5-(hexahydro-2-oxo-1H-thieno[3,4-D]imidazol-6-yl)pentanalBTI
drugDrugBank DB07497
Coenzyme ACOA
drugDrugBank DB01992

Pfam Families

PF01039Carboxyl_trans

Carboxyl transferase domain

ClanCL0127ClpP_crotonase

External Links

ECOD PDB View: 6YBQ RCSB PDB: 6YBQ PDBe: 6YBQ UniProt: C5AP75

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.