ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6ydfA1 - ECOD Domain | ECOD

ECOD/Domains/e6ydfA1

e6ydfA1

UID: 002674653

PDB

Range: A:2-224
PDB: 6YDF chain A(all domains)
UniProt: A0A223GEC9 (all domains)
Gene: AA9A

Molecule: LPMO lytic polysaccharide monooxygenase

3D Structure

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Related Domains

Browse other domains in AA9 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyAA9(11.1.1.57)

Ligands

in contact, ≤ 4 Å

COPPER (II) IONCU
metal

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Auxiliary Activity family 9 (formerly GH61)

ClanCL0159E-set

External Links

ECOD PDB View: 6YDF RCSB PDB: 6YDF PDBe: 6YDF UniProt: A0A223GEC9

Downloads

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