ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6zpeA1 - ECOD Domain | ECOD

ECOD/Domains/e6zpeA1

e6zpeA1

UID: 002677064

PDB

Range: A:7-130
PDB: 6ZPE chain A(all domains)
UniProt: P0DTD1 (all domains)
Gene: rep

Molecule: Replicase polyprotein 1ab

3D Structure

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Related Domains

Browse other domains in CoV_NSP10 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupCoronavirus NSP10-like(4136)

HH-groupCoronavirus NSP10-like(4136.1)

TT-groupCoronavirus NSP10-like(4136.1.1)

FFamilyCoV_NSP10(4136.1.1.1)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Zinc ionZN
metal

+ 1 additive (Glycerin)

GlycerinGOL

Pfam Families

PF09401CoV_NSP10

Coronavirus RNA synthesis protein NSP10

External Links

ECOD PDB View: 6ZPE RCSB PDB: 6ZPE PDBe: 6ZPE UniProt: P0DTD1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.