ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6zs3B1 - ECOD Domain | ECOD

ECOD/Domains/e6zs3B1

e6zs3B1

UID: 002677528

PDB

Range: B:653-762
PDB: 6ZS3 chain B(all domains)
UniProt: Q86U86 (all domains)
Gene: PBRM1

Molecule: Protein polybromo-1

3D Structure

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Related Domains

Browse other domains in Bromodomain →

Classification

AArchitecturealpha bundles(a.7)

XX-groupBromodomain-like(633)

HH-groupBromodomain(633.1)

TT-groupBromodomain(633.1.1)

FFamilyBromodomain(633.1.1.1)

Ligands

in contact, ≤ 4 Å

2-(6-azanyl-5-piperazin-4-ium-1-yl-pyridazin-3-yl)phenolFX5

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00439Bromodomain

Bromodomain

External Links

ECOD PDB View: 6ZS3 RCSB PDB: 6ZS3 PDBe: 6ZS3 UniProt: Q86U86

Downloads

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