ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6zsgAX1 - ECOD Domain | ECOD

ECOD/Domains/e6zsgAX1

e6zsgAX1

UID: 002678079

PDB

Range: AX:1-145,AX:170-348
PDB: 6ZSG chain AX(all domains)
UniProt: P51398 (all domains)
Gene: DAP3

Molecule: 28S ribosomal protein S29, mitochondrial

3D Structure

Loading viewer...

Related Domains

Browse other domains in DAP3 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyDAP3(2004.1.1.172)

Ligands

in contact, ≤ 4 Å

Guanosine-5'-TriphosphateGTP
drugDrugBank DB04137

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Mitochondrial ribosomal death-associated protein 3

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 6ZSG RCSB PDB: 6ZSG PDBe: 6ZSG UniProt: P51398

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure