ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6zxyB1 - ECOD Domain | ECOD

ECOD/Domains/e6zxyB1

e6zxyB1

UID: 002679064

PDB

Range: B:140-321
PDB: 6ZXY chain B(all domains)
UniProt: O29011 (all domains)
Gene: trmG10

Molecule: tRNA (Guanine(10)-N2)-dimethyltransferase

3D Structure

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Related Domains

Browse other domains in UPF0020 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyUPF0020(2003.1.5.5)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01170UPF0020

RMKL-like, methyltransferase domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 6ZXY RCSB PDB: 6ZXY PDBe: 6ZXY UniProt: O29011

Downloads

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