ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1a15A1 - ECOD Domain | ECOD

ECOD/Domains/e1a15A1

e1a15A1

UID: 000026819

PDB

Range: A:1-67
PDB: 1A15 chain A(all domains)
UniProt: P48061 (all domains)
Gene: CXCL12

Molecule: STROMAL DERIVED FACTOR-1ALPHA

3D Structure

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Related Domains

Browse other domains in IL8 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupIL8-related(1170)

HH-groupIL8-related(1170.1)

TT-groupIL8(1170.1.1)

FFamilyIL8(1170.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Small cytokines (intecrine/chemokine), interleukin-8 like

ClanCL0730IL8

External Links

ECOD PDB View: 1A15 RCSB PDB: 1A15 PDBe: 1A15 UniProt: P48061

Downloads

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