ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6xptA1 - ECOD Domain | ECOD

ECOD/Domains/e6xptA1

e6xptA1

UID: 002697408

PDB

Range: A:1-153
PDB: 6XPT chain A(all domains)
UniProt: Q7Z8P9 (all domains)
Gene: ndk1

Molecule: Nucleoside diphosphate kinase

3D Structure

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Related Domains

Browse other domains in NDK →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupNucleoside diphosphate kinases(304.34)

TT-groupNucleoside diphosphate kinases(304.34.1)

FFamilyNDK(304.34.1.1)

Ligands

in contact, ≤ 4 Å

Uridine-5'-DiphosphateUDP
drugDrugBank DB03435

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Nucleoside diphosphate kinase

External Links

ECOD PDB View: 6XPT RCSB PDB: 6XPT PDBe: 6XPT UniProt: Q7Z8P9

Downloads

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